Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atxn1P54254 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atxn1P54254 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.98□□□□□ -0.65
Atxn1P54254 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Atxn1P54254 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Atxn1P54254 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atxn1P54254 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atxn1P54254 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Atxn1P54254 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm23439-201ENSMUST00000104292 132 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Gm14113-201ENSMUST00000121399 976 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.97□□□□□ -0.65
Atxn1P54254 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm2474-201ENSMUST00000195162 559 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Gm43726-201ENSMUST00000199110 775 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm43811-201ENSMUST00000202862 695 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm44814-201ENSMUST00000207018 434 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.97□□□□□ -0.65
Atxn1P54254 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.97□□□□□ -0.65
Atxn1P54254 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.97□□□□□ -0.65
Atxn1P54254 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Atxn1P54254 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.97□□□□□ -0.65
Atxn1P54254 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atxn1P54254 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Gm6755-201ENSMUST00000100598 864 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm6740-201ENSMUST00000100617 864 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Mir3060-201ENSMUST00000175339 83 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Gm20694-201ENSMUST00000176943 404 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Gm7572-201ENSMUST00000182616 766 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm27440-201ENSMUST00000184785 107 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm18552-201ENSMUST00000187425 538 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.96□□□□□ -0.65
Atxn1P54254 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.96□□□□□ -0.65
Atxn1P54254 Gm8226-201ENSMUST00000190511 798 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Gm44323-201ENSMUST00000198689 129 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm5650-201ENSMUST00000209641 598 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 Gm26782-203ENSMUST00000227103 751 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.96□□□□□ -0.65
Atxn1P54254 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Atxn1P54254 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atxn1P54254 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Atxn1P54254 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atxn1P54254 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atxn1P54254 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atxn1P54254 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Atxn1P54254 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Atxn1P54254 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atxn1P54254 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atxn1P54254 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.96□□□□□ -0.66
Atxn1P54254 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms