Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm12986-201ENSMUST00000119037 967 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm12453-201ENSMUST00000121981 331 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm12906-201ENSMUST00000154610 441 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm25677-201ENSMUST00000174983 72 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Mir6941-201ENSMUST00000184711 59 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm18801-201ENSMUST00000186616 536 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm43969-201ENSMUST00000204833 535 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.42□□□□□ -0.74
Nkx2-6P43688 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-6P43688 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Snord17-201ENSMUST00000104526 238 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25226-201ENSMUST00000158198 123 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm23400-201ENSMUST00000174994 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm26463-201ENSMUST00000175065 101 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm24332-201ENSMUST00000175102 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25959-201ENSMUST00000175112 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm22475-201ENSMUST00000175169 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm22903-201ENSMUST00000175193 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25070-201ENSMUST00000175237 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm24159-201ENSMUST00000175264 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25299-201ENSMUST00000175283 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm23798-201ENSMUST00000175560 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm23802-201ENSMUST00000175565 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25708-201ENSMUST00000177687 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm24370-201ENSMUST00000178007 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm23049-201ENSMUST00000178068 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm28019-201ENSMUST00000178138 101 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25571-201ENSMUST00000178322 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25355-201ENSMUST00000178456 101 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm24975-201ENSMUST00000178492 101 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm23189-201ENSMUST00000178954 102 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm25100-201ENSMUST00000179750 101 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm23064-201ENSMUST00000179866 101 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm18014-201ENSMUST00000183369 817 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm31274-201ENSMUST00000197356 229 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm26782-203ENSMUST00000227103 751 ntBASIC10.41□□□□□ -0.74
Nkx2-6P43688 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-6P43688 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-6P43688 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms