Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cdx2P43241 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx2P43241 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Cdx2P43241 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Cdx2P43241 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.45□□□□□ -0.74
Cdx2P43241 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Gm6755-201ENSMUST00000100598 864 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Gm6740-201ENSMUST00000100617 864 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Gm5510-201ENSMUST00000117826 486 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.45□□□□□ -0.74
Cdx2P43241 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Mir1941-201ENSMUST00000157834 83 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Gm37688-201ENSMUST00000195195 465 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.45□□□□□ -0.74
Cdx2P43241 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cdx2P43241 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx2P43241 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx2P43241 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.44□□□□□ -0.74
Cdx2P43241 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.44□□□□□ -0.74
Cdx2P43241 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm15815-201ENSMUST00000120569 255 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm13688-201ENSMUST00000121557 608 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Gm13857-201ENSMUST00000139645 173 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.44□□□□□ -0.74
Cdx2P43241 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdx2P43241 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm18555-201ENSMUST00000197935 584 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm3527-201ENSMUST00000198905 460 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC10.44□□□□□ -0.74
Cdx2P43241 Gm42689-201ENSMUST00000202403 404 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm43811-201ENSMUST00000202862 695 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdx2P43241 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm18042-201ENSMUST00000219887 790 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.44□□□□□ -0.74
Cdx2P43241 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx2P43241 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Cdx2P43241 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms