Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.3□□□□□ -0.6
Cxcl12P40224 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Btrc-209ENSMUST00000224478 2194 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm22751-201ENSMUST00000102077 109 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm8162-201ENSMUST00000213951 665 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Gm8960-201ENSMUST00000219787 788 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.29□□□□□ -0.6
Cxcl12P40224 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl12P40224 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl12P40224 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl12P40224 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Snora68-201ENSMUST00000104375 131 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm26379-201ENSMUST00000178125 138 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms