Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Traf1P39428 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.76□□□□□ -0.37
Traf1P39428 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Gm26119-201ENSMUST00000175601 104 ntBASIC12.76□□□□□ -0.37
Traf1P39428 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.76□□□□□ -0.37
Traf1P39428 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.76□□□□□ -0.37
Traf1P39428 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.76□□□□□ -0.37
Traf1P39428 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.76□□□□□ -0.37
Traf1P39428 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Traf1P39428 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Traf1P39428 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Traf1P39428 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Traf1P39428 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Traf1P39428 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Traf1P39428 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Traf1P39428 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.75□□□□□ -0.37
Traf1P39428 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.75□□□□□ -0.37
Traf1P39428 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Traf1P39428 Gm17221-201ENSMUST00000163909 481 ntBASIC12.75□□□□□ -0.37
Traf1P39428 Gm17073-201ENSMUST00000168069 556 ntBASIC12.75□□□□□ -0.37
Traf1P39428 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.75□□□□□ -0.37
Traf1P39428 Gm19927-201ENSMUST00000185792 781 ntBASIC12.75□□□□□ -0.37
Traf1P39428 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.75□□□□□ -0.37
Traf1P39428 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.75□□□□□ -0.37
Traf1P39428 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Traf1P39428 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Traf1P39428 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Traf1P39428 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.75□□□□□ -0.37
Traf1P39428 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.75□□□□□ -0.37
Traf1P39428 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.75□□□□□ -0.37
Traf1P39428 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.75□□□□□ -0.37
Traf1P39428 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Traf1P39428 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.74□□□□□ -0.37
Traf1P39428 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.74□□□□□ -0.37
Traf1P39428 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Traf1P39428 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.74□□□□□ -0.37
Traf1P39428 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.74□□□□□ -0.37
Traf1P39428 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Traf1P39428 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Traf1P39428 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.74□□□□□ -0.37
Traf1P39428 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Traf1P39428 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms