Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04224 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
P04224 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04224 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
P04224 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04224 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04224 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
P04224 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.62□□□□□ -0.87
P04224 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04224 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.62□□□□□ -0.87
P04224 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.61□□□□□ -0.87
P04224 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.61□□□□□ -0.87
P04224 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.61□□□□□ -0.87
P04224 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Gm22133-201ENSMUST00000102082 109 ntBASIC9.61□□□□□ -0.87
P04224 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.61□□□□□ -0.87
P04224 Gm13296-201ENSMUST00000117854 997 ntBASIC9.61□□□□□ -0.87
P04224 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Gm27516-201ENSMUST00000184237 98 ntBASIC9.61□□□□□ -0.87
P04224 Gm37597-201ENSMUST00000191853 382 ntBASIC9.61□□□□□ -0.87
P04224 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Gm17827-201ENSMUST00000211825 742 ntBASIC9.61□□□□□ -0.87
P04224 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.61□□□□□ -0.87
P04224 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.61□□□□□ -0.87
P04224 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.61□□□□□ -0.87
P04224 Gm7399-201ENSMUST00000032395 858 ntBASIC9.61□□□□□ -0.87
P04224 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.61□□□□□ -0.87
P04224 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
P04224 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.61□□□□□ -0.87
P04224 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
P04224 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.61□□□□□ -0.87
P04224 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.61□□□□□ -0.87
P04224 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.61□□□□□ -0.87
P04224 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.61□□□□□ -0.87
P04224 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P04224 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.6□□□□□ -0.87
P04224 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
P04224 Gm13392-201ENSMUST00000117708 150 ntBASIC9.6□□□□□ -0.87
P04224 Gm14071-201ENSMUST00000117817 509 ntBASIC9.6□□□□□ -0.87
P04224 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.6□□□□□ -0.87
P04224 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.6□□□□□ -0.87
P04224 Gm26047-201ENSMUST00000157308 113 ntBASIC9.6□□□□□ -0.87
P04224 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04224 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
P04224 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms