Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm11663-201ENSMUST00000117888 290 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Mir1896-201ENSMUST00000122641 81 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm15276-201ENSMUST00000145953 498 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Olfml3-204ENSMUST00000169286 874 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm25890-201ENSMUST00000177643 165 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm25700-201ENSMUST00000177693 110 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm22614-201ENSMUST00000178300 165 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm29615-201ENSMUST00000185371 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28224-201ENSMUST00000186078 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm29001-201ENSMUST00000186177 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28292-201ENSMUST00000186593 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28101-201ENSMUST00000187608 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm29076-201ENSMUST00000187689 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28302-201ENSMUST00000187931 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28646-201ENSMUST00000188220 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28205-201ENSMUST00000189177 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm29032-201ENSMUST00000189797 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm28695-201ENSMUST00000190300 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm37448-201ENSMUST00000192795 697 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm45856-201ENSMUST00000212752 416 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm2594-201ENSMUST00000214774 742 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm22042-201ENSMUST00000082989 165 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm26110-201ENSMUST00000083971 165 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm37084-201ENSMUST00000191688 5898 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Mir877-201ENSMUST00000104738 85 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm12857-201ENSMUST00000117678 592 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm8815-201ENSMUST00000173809 620 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm18038-201ENSMUST00000197900 485 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Gm6867-201ENSMUST00000219165 425 ntBASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim13Q9CYB0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms