Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm11686-201ENSMUST00000122397 333 ntBASIC10.83□□□□□ -0.68
Cdh23Q99PF4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm7001-201ENSMUST00000219384 1465 ntBASIC10.83□□□□□ -0.68
Cdh23Q99PF4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm7823-201ENSMUST00000120761 1623 ntBASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 AC160109.1-201ENSMUST00000225592 729 ntBASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm22481-201ENSMUST00000122562 192 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm37261-201ENSMUST00000194360 1101 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm42710-201ENSMUST00000200608 985 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm24470-201ENSMUST00000104486 132 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm34780-201ENSMUST00000193896 949 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 n-R5s5-201ENSMUST00000083134 119 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Gm44139-201ENSMUST00000204903 373 ntBASIC10.82□□□□□ -0.68
Cdh23Q99PF4 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cdh23Q99PF4 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm26241-201ENSMUST00000174944 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm23976-201ENSMUST00000175001 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm22463-201ENSMUST00000175274 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm22547-201ENSMUST00000175281 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm22913-201ENSMUST00000175297 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm23282-201ENSMUST00000175306 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm25972-201ENSMUST00000175374 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm22414-201ENSMUST00000175466 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm26235-201ENSMUST00000175533 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm25084-201ENSMUST00000175556 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm24973-201ENSMUST00000175588 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm23292-201ENSMUST00000175618 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm23646-201ENSMUST00000178119 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm24643-201ENSMUST00000178305 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm24302-201ENSMUST00000178350 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm26386-201ENSMUST00000178407 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm25458-201ENSMUST00000178981 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm22825-201ENSMUST00000179444 101 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm7516-201ENSMUST00000186198 706 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms