Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm16209-201ENSMUST00000118457 627 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm10171-201ENSMUST00000126220 628 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm20493-201ENSMUST00000173706 213 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm26443-201ENSMUST00000179610 110 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm42599-201ENSMUST00000201308 469 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm43866-201ENSMUST00000203894 839 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm10233-201ENSMUST00000089275 628 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx6-1Q99MA9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Mir1249-201ENSMUST00000116791 98 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm12745-201ENSMUST00000121767 214 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm27444-201ENSMUST00000184157 137 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm5254-201ENSMUST00000188353 977 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Nkx6-1Q99MA9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms