Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm24541-201ENSMUST00000103871 96 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm14592-201ENSMUST00000117201 560 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm5510-201ENSMUST00000117826 486 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm12849-201ENSMUST00000120013 739 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm4462-201ENSMUST00000166453 492 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm37688-201ENSMUST00000195195 465 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm8643-201ENSMUST00000195228 625 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm8162-201ENSMUST00000213951 665 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm7904-201ENSMUST00000217049 465 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm8170-201ENSMUST00000218581 945 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.67□□□□□ -0.54
Clp1Q99LI9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clp1Q99LI9 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm15815-201ENSMUST00000120569 255 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm14006-201ENSMUST00000122132 981 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm16441-201ENSMUST00000138176 924 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm15258-201ENSMUST00000153801 741 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm6038-201ENSMUST00000154310 948 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm16228-201ENSMUST00000162286 809 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm6677-201ENSMUST00000195100 441 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm43811-201ENSMUST00000202862 695 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm44420-201ENSMUST00000203669 490 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm6794-201ENSMUST00000203829 457 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm45276-201ENSMUST00000209549 1086 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 AC153936.1-201ENSMUST00000219874 395 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.66□□□□□ -0.54
Clp1Q99LI9 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clp1Q99LI9 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clp1Q99LI9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clp1Q99LI9 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.65□□□□□ -0.54
Clp1Q99LI9 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.65□□□□□ -0.54
Clp1Q99LI9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Clp1Q99LI9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms