Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm14716-201ENSMUST00000120138 718 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm6517-201ENSMUST00000121056 511 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm25694-201ENSMUST00000175448 282 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm43097-201ENSMUST00000196867 151 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm9523-201ENSMUST00000199146 1159 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm18621-201ENSMUST00000222677 679 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm5191-201ENSMUST00000222882 1236 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 AC139155.1-201ENSMUST00000226043 444 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm12716-201ENSMUST00000120606 1354 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm45110-201ENSMUST00000205704 1402 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm14650-201ENSMUST00000120400 889 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm9273-201ENSMUST00000200606 715 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm6008-201ENSMUST00000206542 874 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 AC166061.1-201ENSMUST00000225163 1138 ntBASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx54Q8K4L0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Snora68-201ENSMUST00000104375 131 ntBASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm11544-201ENSMUST00000120215 382 ntBASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm16480-201ENSMUST00000120439 832 ntBASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Platr10-202ENSMUST00000191479 818 ntBASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 AC130217.1-201ENSMUST00000224146 909 ntBASIC14.35□□□□□ -0.11
Ddx54Q8K4L0 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms