Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.77□□□□□ -0.36
Alx1Q8C8B0 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm20392-201ENSMUST00000173047 701 ntBASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm44155-201ENSMUST00000203923 412 ntBASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm4903-201ENSMUST00000210462 405 ntBASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Alx1Q8C8B0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm23218-201ENSMUST00000158124 276 ntBASIC12.76□□□□□ -0.37
Alx1Q8C8B0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm42859-201ENSMUST00000199572 193 ntBASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm18466-201ENSMUST00000209147 499 ntBASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Alx1Q8C8B0 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.76□□□□□ -0.37
Alx1Q8C8B0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms