Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm14892-201ENSMUST00000117636 267 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm1848-201ENSMUST00000120711 789 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm9550-201ENSMUST00000161130 862 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm39288-201ENSMUST00000210554 446 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Gm10179-201ENSMUST00000086233 688 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trub1Q8C0D0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm12029-201ENSMUST00000120073 832 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm11952-201ENSMUST00000121172 821 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm19459-201ENSMUST00000176240 835 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Mir7076-201ENSMUST00000183519 74 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm40414-201ENSMUST00000197608 481 ntBASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trub1Q8C0D0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Snord23-201ENSMUST00000116828 109 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm6407-201ENSMUST00000176468 549 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm7985-201ENSMUST00000183329 981 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm19927-201ENSMUST00000185792 781 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms