Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim35Q8C006 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Mir463-201ENSMUST00000093570 75 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim35Q8C006 Gm44834-201ENSMUST00000206671 1396 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.77□□□□□ -0.37
Trim35Q8C006 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim35Q8C006 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm13614-201ENSMUST00000117306 503 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm11984-201ENSMUST00000118142 766 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm13369-201ENSMUST00000119442 987 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm15828-201ENSMUST00000119911 522 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm15224-201ENSMUST00000120501 388 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm16471-201ENSMUST00000121940 618 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm13194-201ENSMUST00000142299 311 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm5554-201ENSMUST00000199726 1206 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim35Q8C006 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim35Q8C006 AC112274.2-201ENSMUST00000218436 170 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 AC126939.2-201ENSMUST00000225989 307 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm22575-201ENSMUST00000082981 110 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm25410-201ENSMUST00000083758 137 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm6327-201ENSMUST00000171185 1335 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm8165-201ENSMUST00000095981 1404 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm37842-201ENSMUST00000192330 1569 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 AC154323.3-201ENSMUST00000226927 1660 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.76□□□□□ -0.37
Trim35Q8C006 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim35Q8C006 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim35Q8C006 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim35Q8C006 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.75□□□□□ -0.37
Trim35Q8C006 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim35Q8C006 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms