Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gm7904-201ENSMUST00000217049 465 ntBASIC12.75□□□□□ -0.37
Nup98Q6PFD9 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm13792-201ENSMUST00000121350 423 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm33707-201ENSMUST00000195135 569 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm15636-201ENSMUST00000119205 668 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm14176-201ENSMUST00000121302 477 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm6612-201ENSMUST00000170777 395 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm28179-201ENSMUST00000188365 613 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm42859-201ENSMUST00000199572 193 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup98Q6PFD9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup98Q6PFD9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Nup98Q6PFD9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms