Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm20414-201ENSMUST00000172918 646 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm43506-201ENSMUST00000200675 753 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rc3h1Q4VGL6 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm17070-201ENSMUST00000170463 784 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm9162-201ENSMUST00000182081 991 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm18014-201ENSMUST00000183369 817 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm6649-201ENSMUST00000199743 1165 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm33080-201ENSMUST00000205429 172 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm4903-201ENSMUST00000210462 405 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 AC102542.1-201ENSMUST00000225204 1138 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rc3h1Q4VGL6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rc3h1Q4VGL6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms