Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.4□□□□□ -0.74
Apoa1Q00623 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.4□□□□□ -0.74
Apoa1Q00623 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.4□□□□□ -0.74
Apoa1Q00623 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Gm6082-201ENSMUST00000215204 454 ntBASIC10.4□□□□□ -0.74
Apoa1Q00623 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.4□□□□□ -0.74
Apoa1Q00623 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.4□□□□□ -0.74
Apoa1Q00623 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.4□□□□□ -0.74
Apoa1Q00623 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Apoa1Q00623 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Apoa1Q00623 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.4□□□□□ -0.74
Apoa1Q00623 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Apoa1Q00623 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Apoa1Q00623 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Apoa1Q00623 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Apoa1Q00623 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Apoa1Q00623 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Apoa1Q00623 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Apoa1Q00623 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.4□□□□□ -0.75
Apoa1Q00623 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Apoa1Q00623 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.4□□□□□ -0.75
Apoa1Q00623 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Apoa1Q00623 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm14592-201ENSMUST00000117201 560 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm19246-201ENSMUST00000173599 255 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm28032-201ENSMUST00000184104 96 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm28746-201ENSMUST00000187453 380 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.39□□□□□ -0.75
Apoa1Q00623 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Apoa1Q00623 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Apoa1Q00623 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.38□□□□□ -0.75
Apoa1Q00623 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Apoa1Q00623 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.38□□□□□ -0.75
Apoa1Q00623 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Apoa1Q00623 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Apoa1Q00623 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Apoa1Q00623 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Apoa1Q00623 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms