Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.21□□□□□ -0.94
SgcaP82350 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.21□□□□□ -0.94
SgcaP82350 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.21□□□□□ -0.94
SgcaP82350 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
SgcaP82350 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Gm37424-201ENSMUST00000191727 561 ntBASIC9.21□□□□□ -0.94
SgcaP82350 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.21□□□□□ -0.94
SgcaP82350 Gm7046-201ENSMUST00000221351 977 ntBASIC9.21□□□□□ -0.94
SgcaP82350 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SgcaP82350 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SgcaP82350 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC9.21□□□□□ -0.94
SgcaP82350 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.2□□□□□ -0.94
SgcaP82350 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
SgcaP82350 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gm23931-201ENSMUST00000103842 109 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Gm15370-201ENSMUST00000117158 253 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.2□□□□□ -0.94
SgcaP82350 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Gm9797-202ENSMUST00000218003 294 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gm25857-201ENSMUST00000082788 129 ntBASIC9.2□□□□□ -0.94
SgcaP82350 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SgcaP82350 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.2□□□□□ -0.94
SgcaP82350 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SgcaP82350 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SgcaP82350 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SgcaP82350 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SgcaP82350 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SgcaP82350 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SgcaP82350 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
SgcaP82350 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SgcaP82350 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.19□□□□□ -0.94
SgcaP82350 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SgcaP82350 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SgcaP82350 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms