Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcbP82349 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SgcbP82349 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.9□□□□□ -0.82
SgcbP82349 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SgcbP82349 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
SgcbP82349 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SgcbP82349 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SgcbP82349 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Gm14603-201ENSMUST00000121275 448 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Gm4917-201ENSMUST00000121452 650 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.9□□□□□ -0.82
SgcbP82349 Mir1956-201ENSMUST00000157748 65 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
SgcbP82349 Gm25072-201ENSMUST00000175233 235 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Mir6998-201ENSMUST00000183343 64 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Gm28388-201ENSMUST00000186262 437 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Gm28324-201ENSMUST00000187913 264 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Gm37857-201ENSMUST00000191784 1199 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.9□□□□□ -0.82
SgcbP82349 Gm44607-201ENSMUST00000205611 1090 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.9□□□□□ -0.82
SgcbP82349 Gm5599-201ENSMUST00000209602 788 ntBASIC9.9□□□□□ -0.82
SgcbP82349 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SgcbP82349 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.9□□□□□ -0.82
SgcbP82349 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.9□□□□□ -0.82
SgcbP82349 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SgcbP82349 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcbP82349 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SgcbP82349 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SgcbP82349 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SgcbP82349 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.9□□□□□ -0.83
SgcbP82349 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
SgcbP82349 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SgcbP82349 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SgcbP82349 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.9□□□□□ -0.83
SgcbP82349 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.89□□□□□ -0.83
SgcbP82349 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SgcbP82349 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SgcbP82349 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SgcbP82349 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SgcbP82349 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SgcbP82349 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.89□□□□□ -0.83
SgcbP82349 Gm8185-201ENSMUST00000160999 669 ntBASIC9.89□□□□□ -0.83
SgcbP82349 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Gm27438-201ENSMUST00000183480 110 ntBASIC9.89□□□□□ -0.83
SgcbP82349 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.89□□□□□ -0.83
SgcbP82349 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.89□□□□□ -0.83
SgcbP82349 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.89□□□□□ -0.83
SgcbP82349 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.89□□□□□ -0.83
SgcbP82349 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Gm45219-201ENSMUST00000205602 465 ntBASIC9.89□□□□□ -0.83
SgcbP82349 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.89□□□□□ -0.83
SgcbP82349 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SgcbP82349 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC9.89□□□□□ -0.83
SgcbP82349 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.89□□□□□ -0.83
SgcbP82349 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.89□□□□□ -0.83
SgcbP82349 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcbP82349 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms