Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Lmo4P61969 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Lmo4P61969 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Lmo4P61969 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Lmo4P61969 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Lmo4P61969 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Lmo4P61969 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Gm42970-201ENSMUST00000196407 1352 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC8.88□□□□□ -0.99
Lmo4P61969 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Gm13094-201ENSMUST00000117930 409 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Gm5764-201ENSMUST00000118817 885 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Gm12461-201ENSMUST00000120231 1239 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Gm7255-201ENSMUST00000187371 908 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Gm43244-201ENSMUST00000196994 1285 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Gm18539-201ENSMUST00000204745 1090 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 CT030195.2-201ENSMUST00000226074 1286 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 CT030652.1-201ENSMUST00000227377 1235 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Lmo4P61969 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Lmo4P61969 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Gm11470-201ENSMUST00000118868 1475 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC8.88□□□□□ -0.99
Lmo4P61969 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Lmo4P61969 Rubie-203ENSMUST00000227803 2430 ntBASIC8.88□□□□□ -0.99
Lmo4P61969 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Lmo4P61969 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm38344-201ENSMUST00000195306 1353 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Lmo4P61969 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm8684-201ENSMUST00000195078 1564 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm5526-201ENSMUST00000153604 423 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Mir432-201ENSMUST00000157230 75 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Mir6387-201ENSMUST00000184042 108 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm18010-201ENSMUST00000203553 202 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 AC158388.3-202ENSMUST00000225517 775 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC8.87□□□□□ -0.99
Lmo4P61969 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 Gm25514-201ENSMUST00000083860 135 ntBASIC8.87□□□□□ -0.99
Lmo4P61969 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Lmo4P61969 n-R5s71-201ENSMUST00000093668 119 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms