Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tpm1P58771 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Snord17-201ENSMUST00000104526 238 ntBASIC12.21□□□□□ -0.45
Tpm1P58771 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.21□□□□□ -0.45
Tpm1P58771 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Gm12196-201ENSMUST00000120954 262 ntBASIC12.21□□□□□ -0.45
Tpm1P58771 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.21□□□□□ -0.45
Tpm1P58771 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Gm16505-201ENSMUST00000179981 232 ntBASIC12.21□□□□□ -0.45
Tpm1P58771 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.21□□□□□ -0.45
Tpm1P58771 Gm37301-201ENSMUST00000195412 568 ntBASIC12.21□□□□□ -0.45
Tpm1P58771 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.21□□□□□ -0.45
Tpm1P58771 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Tpm1P58771 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tpm1P58771 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.21□□□□□ -0.46
Tpm1P58771 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Tpm1P58771 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tpm1P58771 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Tpm1P58771 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tpm1P58771 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tpm1P58771 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Gm13263-201ENSMUST00000121271 838 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm25226-201ENSMUST00000158198 123 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm8100-201ENSMUST00000182906 988 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm43058-201ENSMUST00000197645 625 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.2□□□□□ -0.46
Tpm1P58771 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.2□□□□□ -0.46
Tpm1P58771 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tpm1P58771 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Tpm1P58771 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tpm1P58771 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tpm1P58771 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Tpm1P58771 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tpm1P58771 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.19□□□□□ -0.46
Tpm1P58771 Gm25881-201ENSMUST00000157783 103 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm24749-201ENSMUST00000157838 343 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm18734-201ENSMUST00000172937 808 ntBASIC12.19□□□□□ -0.46
Tpm1P58771 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tpm1P58771 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms