Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pdx1P52946 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdx1P52946 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pdx1P52946 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm12274-201ENSMUST00000120062 385 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm12791-201ENSMUST00000120788 655 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm10169-201ENSMUST00000121822 348 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm12030-201ENSMUST00000121917 223 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm12208-201ENSMUST00000122004 163 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm19927-201ENSMUST00000185792 781 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm29410-201ENSMUST00000188383 694 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Gm44545-201ENSMUST00000208262 746 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.85□□□□□ -0.67
Pdx1P52946 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pdx1P52946 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pdx1P52946 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pdx1P52946 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Pdx1P52946 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.84□□□□□ -0.67
Pdx1P52946 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.84□□□□□ -0.67
Pdx1P52946 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pdx1P52946 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 Mir6998-201ENSMUST00000183343 64 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm44814-201ENSMUST00000207018 434 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdx1P52946 Gm7525-201ENSMUST00000219425 454 ntBASIC10.84□□□□□ -0.67
Pdx1P52946 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pdx1P52946 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pdx1P52946 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdx1P52946 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms