Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.22□□□□□ -0.61
SftpbP50405 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.22□□□□□ -0.61
SftpbP50405 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.22□□□□□ -0.61
SftpbP50405 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.22□□□□□ -0.61
SftpbP50405 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.22□□□□□ -0.61
SftpbP50405 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.22□□□□□ -0.61
SftpbP50405 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.22□□□□□ -0.61
SftpbP50405 Gm7848-201ENSMUST00000210739 718 ntBASIC11.22□□□□□ -0.61
SftpbP50405 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.22□□□□□ -0.61
SftpbP50405 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SftpbP50405 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SftpbP50405 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.22□□□□□ -0.61
SftpbP50405 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SftpbP50405 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.21□□□□□ -0.61
SftpbP50405 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SftpbP50405 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SftpbP50405 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.21□□□□□ -0.61
SftpbP50405 Gm11836-201ENSMUST00000121022 441 ntBASIC11.21□□□□□ -0.61
SftpbP50405 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.21□□□□□ -0.61
SftpbP50405 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.21□□□□□ -0.61
SftpbP50405 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SftpbP50405 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Mir6927-201ENSMUST00000184494 71 ntBASIC11.21□□□□□ -0.61
SftpbP50405 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.21□□□□□ -0.61
SftpbP50405 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.21□□□□□ -0.61
SftpbP50405 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.21□□□□□ -0.61
SftpbP50405 Ginm1-202ENSMUST00000065124 300 ntBASIC11.21□□□□□ -0.61
SftpbP50405 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SftpbP50405 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SftpbP50405 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.21□□□□□ -0.62
SftpbP50405 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.21□□□□□ -0.62
SftpbP50405 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SftpbP50405 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SftpbP50405 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SftpbP50405 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.2□□□□□ -0.62
SftpbP50405 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Gm12419-201ENSMUST00000116649 636 ntBASIC11.2□□□□□ -0.62
SftpbP50405 Gm12217-201ENSMUST00000118858 696 ntBASIC11.2□□□□□ -0.62
SftpbP50405 Gm15615-201ENSMUST00000118876 198 ntBASIC11.2□□□□□ -0.62
SftpbP50405 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.2□□□□□ -0.62
SftpbP50405 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.2□□□□□ -0.62
SftpbP50405 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Gm7666-201ENSMUST00000146631 819 ntBASIC11.2□□□□□ -0.62
SftpbP50405 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SftpbP50405 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SftpbP50405 Gm10774-201ENSMUST00000188689 204 ntBASIC11.2□□□□□ -0.62
SftpbP50405 Gm37597-201ENSMUST00000191853 382 ntBASIC11.2□□□□□ -0.62
SftpbP50405 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SftpbP50405 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
SftpbP50405 Gm23105-201ENSMUST00000083719 134 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms