Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm22711-201ENSMUST00000116890 133 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.94□□□□□ -0.82
Rfx3P48381 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 B9d1os-201ENSMUST00000137010 674 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Mir3547-201ENSMUST00000175461 88 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm3786-201ENSMUST00000202659 378 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rfx3P48381 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.94□□□□□ -0.82
Rfx3P48381 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Rfx3P48381 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rfx3P48381 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm4294-201ENSMUST00000105169 614 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm37284-201ENSMUST00000193607 539 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Gm37981-201ENSMUST00000194280 535 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.93□□□□□ -0.82
Rfx3P48381 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
Rfx3P48381 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms