Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gm43771-201ENSMUST00000202931 1578 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Map1b-203ENSMUST00000223725 2669 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Gm23595-201ENSMUST00000104306 130 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.91□□□□□ -0.66
Sox18P43680 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 Gm14098-201ENSMUST00000119295 623 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC10.91□□□□□ -0.66
Sox18P43680 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gm6612-201ENSMUST00000170777 395 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Gm17711-201ENSMUST00000172028 237 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Gm29304-201ENSMUST00000186555 695 ntBASIC10.91□□□□□ -0.66
Sox18P43680 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 Gm29223-201ENSMUST00000188867 695 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gm2345-201ENSMUST00000193451 589 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Gm37921-201ENSMUST00000194333 695 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.91□□□□□ -0.66
Sox18P43680 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 Gm17825-201ENSMUST00000206836 794 ntBASIC10.91□□□□□ -0.66
Sox18P43680 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC10.91□□□□□ -0.66
Sox18P43680 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC10.91□□□□□ -0.66
Sox18P43680 AC126673.2-201ENSMUST00000221052 686 ntBASIC10.91□□□□□ -0.66
Sox18P43680 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.91□□□□□ -0.66
Sox18P43680 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.91□□□□□ -0.66
Sox18P43680 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.91□□□□□ -0.66
Sox18P43680 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gm4978-201ENSMUST00000071565 801 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Sox18P43680 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox18P43680 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.91□□□□□ -0.66
Sox18P43680 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox18P43680 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm44897-201ENSMUST00000206187 1341 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
Sox18P43680 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm12327-201ENSMUST00000121729 1168 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm11993-201ENSMUST00000121861 820 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.9□□□□□ -0.66
Sox18P43680 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm25492-201ENSMUST00000157383 129 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm17221-201ENSMUST00000163909 481 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm17073-201ENSMUST00000168069 556 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm20689-201ENSMUST00000176033 279 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox18P43680 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox18P43680 Gm29640-201ENSMUST00000187972 278 ntBASIC10.9□□□□□ -0.66
Sox18P43680 Gm20915-201ENSMUST00000191575 663 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms