Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pbx1P41778 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pbx1P41778 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pbx1P41778 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pbx1P41778 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pbx1P41778 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pbx1P41778 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pbx1P41778 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm12165-201ENSMUST00000117047 342 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Gm15554-201ENSMUST00000120406 913 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Gm3828-201ENSMUST00000121817 257 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm5244-201ENSMUST00000164001 339 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm37466-201ENSMUST00000195692 652 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pbx1P41778 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.79□□□□□ -0.52
Pbx1P41778 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.79□□□□□ -0.52
Pbx1P41778 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pbx1P41778 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pbx1P41778 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pbx1P41778 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pbx1P41778 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.78□□□□□ -0.52
Pbx1P41778 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.78□□□□□ -0.52
Pbx1P41778 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm11949-201ENSMUST00000117640 372 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.78□□□□□ -0.52
Pbx1P41778 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.78□□□□□ -0.52
Pbx1P41778 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm19353-201ENSMUST00000184561 445 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Gm27953-201ENSMUST00000185171 143 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm45310-201ENSMUST00000210436 275 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.78□□□□□ -0.52
Pbx1P41778 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pbx1P41778 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms