Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.79□□□□□ -0.84
P20040 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.79□□□□□ -0.84
P20040 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
P20040 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.79□□□□□ -0.84
P20040 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P20040 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P20040 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.79□□□□□ -0.84
P20040 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.78□□□□□ -0.84
P20040 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.78□□□□□ -0.84
P20040 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.78□□□□□ -0.84
P20040 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.78□□□□□ -0.84
P20040 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
P20040 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
P20040 Gm11500-201ENSMUST00000118237 601 ntBASIC9.78□□□□□ -0.84
P20040 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.78□□□□□ -0.84
P20040 Gm14585-201ENSMUST00000120713 634 ntBASIC9.78□□□□□ -0.84
P20040 Gm11836-201ENSMUST00000121022 441 ntBASIC9.78□□□□□ -0.84
P20040 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.78□□□□□ -0.84
P20040 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.78□□□□□ -0.84
P20040 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.78□□□□□ -0.84
P20040 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
P20040 Gm17391-201ENSMUST00000171036 126 ntBASIC9.78□□□□□ -0.84
P20040 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Gm19459-201ENSMUST00000176240 835 ntBASIC9.78□□□□□ -0.84
P20040 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Gm21092-201ENSMUST00000178995 955 ntBASIC9.78□□□□□ -0.84
P20040 Gm4654-201ENSMUST00000183305 982 ntBASIC9.78□□□□□ -0.84
P20040 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
P20040 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.78□□□□□ -0.84
P20040 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.78□□□□□ -0.84
P20040 Gm45398-201ENSMUST00000210561 165 ntBASIC9.78□□□□□ -0.84
P20040 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.78□□□□□ -0.84
P20040 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.78□□□□□ -0.84
P20040 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.78□□□□□ -0.84
P20040 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.78□□□□□ -0.84
P20040 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.78□□□□□ -0.84
P20040 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.78□□□□□ -0.84
P20040 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
P20040 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.78□□□□□ -0.84
P20040 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.78□□□□□ -0.84
P20040 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P20040 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
P20040 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.78□□□□□ -0.84
P20040 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
P20040 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.78□□□□□ -0.84
P20040 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P20040 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.77□□□□□ -0.84
P20040 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.77□□□□□ -0.84
P20040 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
P20040 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
P20040 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P20040 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P20040 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.77□□□□□ -0.85
P20040 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P20040 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P20040 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P20040 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms