Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gm18561-201ENSMUST00000206027 804 ntBASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp6P0C0A3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm25766-201ENSMUST00000104101 131 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm22138-201ENSMUST00000158748 128 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm10263-201ENSMUST00000085163 300 ntBASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp6P0C0A3 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chmp6P0C0A3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms