Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm8185-201ENSMUST00000160999 669 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm10925-201ENSMUST00000189941 678 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm43520-201ENSMUST00000197996 164 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm43066-201ENSMUST00000199589 1260 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.22□□□□□ -0.61
PdgfrbP05622 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.22□□□□□ -0.61
PdgfrbP05622 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.21□□□□□ -0.61
PdgfrbP05622 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Gm30946-201ENSMUST00000198288 724 ntBASIC11.21□□□□□ -0.61
PdgfrbP05622 Gm5599-201ENSMUST00000209602 788 ntBASIC11.21□□□□□ -0.61
PdgfrbP05622 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.21□□□□□ -0.61
PdgfrbP05622 AC154730.1-201ENSMUST00000227874 816 ntBASIC11.21□□□□□ -0.61
PdgfrbP05622 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Gm10020-201ENSMUST00000081993 612 ntBASIC11.21□□□□□ -0.61
PdgfrbP05622 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
PdgfrbP05622 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdgfrbP05622 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
PdgfrbP05622 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
PdgfrbP05622 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
PdgfrbP05622 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PdgfrbP05622 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
PdgfrbP05622 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
PdgfrbP05622 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
PdgfrbP05622 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms