Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm18042-201ENSMUST00000219887 790 ntBASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn2B2RVW2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gm13171-201ENSMUST00000117233 391 ntBASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gm9619-201ENSMUST00000211587 762 ntBASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gm8170-201ENSMUST00000218581 945 ntBASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn2B2RVW2 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Gm6755-201ENSMUST00000100598 864 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Gm6740-201ENSMUST00000100617 864 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Mir1941-201ENSMUST00000157834 83 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Gm10238-201ENSMUST00000089689 408 ntBASIC12.71□□□□□ -0.37
Clrn2B2RVW2 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clrn2B2RVW2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clrn2B2RVW2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 121.9 ms