Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC8.82□□□□□ -1
Gm12887B1AVM1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm37651-201ENSMUST00000194679 1494 ntBASIC8.82□□□□□ -1
Gm12887B1AVM1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Cdh18-207ENSMUST00000226693 2165 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm15329-201ENSMUST00000121408 155 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm24990-201ENSMUST00000157406 323 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm28032-201ENSMUST00000184104 96 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm4482-201ENSMUST00000200876 742 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC8.81□□□□□ -1
Gm12887B1AVM1 AC164437.3-201ENSMUST00000228323 347 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Gm12887B1AVM1 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm9244-201ENSMUST00000056767 2129 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Gm45124-201ENSMUST00000206723 2755 ntBASIC8.81□□□□□ -1
Gm12887B1AVM1 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm12887B1AVM1 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC8.8□□□□□ -1
Gm12887B1AVM1 Gm13910-201ENSMUST00000121752 1428 ntBASIC8.8□□□□□ -1
Gm12887B1AVM1 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Gm12887B1AVM1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm12887B1AVM1 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC8.8□□□□□ -1
Gm12887B1AVM1 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms