Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm11500-201ENSMUST00000118237 601 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm7722-201ENSMUST00000120646 741 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm6963-201ENSMUST00000147879 379 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm5070-201ENSMUST00000177599 862 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm27046-201ENSMUST00000182160 463 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm6334-201ENSMUST00000207083 228 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm45865-201ENSMUST00000211815 945 ntBASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ube4bQ9ES00 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Ube4bQ9ES00 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ube4bQ9ES00 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ube4bQ9ES00 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Ube4bQ9ES00 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ube4bQ9ES00 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ube4bQ9ES00 AC165080.1-201ENSMUST00000215257 3123 ntBASIC10.52□□□□□ -0.72
Ube4bQ9ES00 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm8885-201ENSMUST00000189382 598 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms