Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.45□□□□□ -0.1
U2af1Q9D883 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Gm33080-201ENSMUST00000205429 172 ntBASIC14.45□□□□□ -0.1
U2af1Q9D883 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
U2af1Q9D883 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
U2af1Q9D883 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.44□□□□□ -0.1
U2af1Q9D883 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
U2af1Q9D883 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Gm31274-201ENSMUST00000197356 229 ntBASIC14.44□□□□□ -0.1
U2af1Q9D883 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.44□□□□□ -0.1
U2af1Q9D883 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
U2af1Q9D883 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.44□□□□□ -0.1
U2af1Q9D883 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.44□□□□□ -0.1
U2af1Q9D883 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.44□□□□□ -0.1
U2af1Q9D883 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
U2af1Q9D883 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
U2af1Q9D883 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Gm20781-201ENSMUST00000193154 693 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 Gm21736-201ENSMUST00000195399 693 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 Gm18035-201ENSMUST00000211962 589 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 AC154461.3-201ENSMUST00000224831 573 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 Gm4604-201ENSMUST00000025040 390 ntBASIC14.43□□□□□ -0.1
U2af1Q9D883 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U2af1Q9D883 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.43□□□□□ -0.1
U2af1Q9D883 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms