Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm30285-201ENSMUST00000214614 422 ntBASIC11.04□□□□□ -0.64
Sf3a3Q9D554 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm9823-201ENSMUST00000051212 327 ntBASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Sept6-202ENSMUST00000060474 3457 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm23931-201ENSMUST00000103842 109 ntBASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm11509-201ENSMUST00000117358 325 ntBASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm8602-201ENSMUST00000184045 607 ntBASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm37489-201ENSMUST00000191883 159 ntBASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sf3a3Q9D554 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sf3a3Q9D554 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm3096-201ENSMUST00000185770 364 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm38321-201ENSMUST00000195053 235 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm45598-202ENSMUST00000210719 986 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm45880-201ENSMUST00000213041 853 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sf3a3Q9D554 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3a3Q9D554 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3a3Q9D554 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sf3a3Q9D554 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms