Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim11Q99PQ2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm25076-201ENSMUST00000104098 132 ntBASIC12.56□□□□□ -0.4
Trim11Q99PQ2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm43916-201ENSMUST00000205062 967 ntBASIC12.56□□□□□ -0.4
Trim11Q99PQ2 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.56□□□□□ -0.4
Trim11Q99PQ2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim11Q99PQ2 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm9133-201ENSMUST00000118289 540 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm12566-201ENSMUST00000121479 359 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm28746-201ENSMUST00000187453 380 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Platr10-202ENSMUST00000191479 818 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm30946-201ENSMUST00000198288 724 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm43378-201ENSMUST00000199336 582 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Gm43377-201ENSMUST00000201640 455 ntBASIC12.55□□□□□ -0.4
Trim11Q99PQ2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim11Q99PQ2 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms