Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 CT025538.1-201ENSMUST00000223638 369 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 AC161581.1-201ENSMUST00000228696 318 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm10254-201ENSMUST00000052888 867 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm12904-201ENSMUST00000117451 1399 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm2316-201ENSMUST00000190613 921 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 AC116390.1-201ENSMUST00000227975 670 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm38309-201ENSMUST00000192063 1518 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm18857-201ENSMUST00000210421 901 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Dcstamp-205ENSMUST00000228556 1684 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm12529-201ENSMUST00000119529 268 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 AC140393.4-201ENSMUST00000226994 765 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm11546-201ENSMUST00000120297 354 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Ighv1-33-201ENSMUST00000193220 350 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm18646-201ENSMUST00000212240 1063 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdh23Q99PF4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.83□□□□□ -0.67
Cdh23Q99PF4 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC10.83□□□□□ -0.67
Cdh23Q99PF4 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cdh23Q99PF4 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.83□□□□□ -0.67
Cdh23Q99PF4 Gm7664-201ENSMUST00000221988 745 ntBASIC10.83□□□□□ -0.67
Cdh23Q99PF4 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.83□□□□□ -0.67
Cdh23Q99PF4 AC123533.3-201ENSMUST00000228056 454 ntBASIC10.83□□□□□ -0.67
Cdh23Q99PF4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh23Q99PF4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms