Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.62□□□□□ -0.23
RtcbQ99LF4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RtcbQ99LF4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm12345-201ENSMUST00000119288 898 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm4868-201ENSMUST00000164138 789 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm5311-201ENSMUST00000203518 709 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm18256-201ENSMUST00000209087 907 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm8162-201ENSMUST00000213951 665 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.61□□□□□ -0.23
RtcbQ99LF4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RtcbQ99LF4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.61□□□□□ -0.23
RtcbQ99LF4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RtcbQ99LF4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm11540-201ENSMUST00000117457 780 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm14699-201ENSMUST00000122340 228 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm8464-202ENSMUST00000146697 1142 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm4750-201ENSMUST00000151942 1142 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm25591-201ENSMUST00000177317 94 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm20091-201ENSMUST00000179683 189 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm7833-201ENSMUST00000183288 990 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm44908-201ENSMUST00000208610 266 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.6□□□□□ -0.23
RtcbQ99LF4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RtcbQ99LF4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.59□□□□□ -0.23
RtcbQ99LF4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RtcbQ99LF4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms