Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim29Q8R2Q0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim29Q8R2Q0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim29Q8R2Q0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim29Q8R2Q0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm16071-201ENSMUST00000119589 793 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm27910-201ENSMUST00000185004 107 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm17826-201ENSMUST00000189720 798 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm45118-201ENSMUST00000208928 825 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim29Q8R2Q0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm10263-201ENSMUST00000085163 300 ntBASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim29Q8R2Q0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms