Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H2afjQ8R1M2 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm8731-201ENSMUST00000118088 412 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm11573-201ENSMUST00000119956 394 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm24990-201ENSMUST00000157406 323 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Olfml3-204ENSMUST00000169286 874 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm12407-201ENSMUST00000180219 324 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm43852-201ENSMUST00000202098 917 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm44506-201ENSMUST00000206278 965 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm19208-201ENSMUST00000213861 912 ntBASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afjQ8R1M2 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm14193-201ENSMUST00000105067 153 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm7851-201ENSMUST00000117574 323 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm15617-201ENSMUST00000118973 771 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm11941-201ENSMUST00000119904 610 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Mir1896-201ENSMUST00000122641 81 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm1821-202ENSMUST00000227415 750 ntBASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afjQ8R1M2 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms