Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Gm38246-201ENSMUST00000194318 1511 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Ddx54Q8K4L0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm24161-201ENSMUST00000104592 130 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm12047-201ENSMUST00000117561 944 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm27390-201ENSMUST00000184516 176 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm42908-201ENSMUST00000197508 870 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm18862-201ENSMUST00000204643 933 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 AC165092.1-201ENSMUST00000224018 486 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 AC127583.1-201ENSMUST00000224351 540 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx54Q8K4L0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Gm15702-201ENSMUST00000119680 444 ntBASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx54Q8K4L0 Bcl2-202ENSMUST00000189999 2841 ntBASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx54Q8K4L0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms