Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm19459-201ENSMUST00000176240 835 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm6407-201ENSMUST00000176468 549 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm19927-201ENSMUST00000185792 781 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm6677-201ENSMUST00000195100 441 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm5865-201ENSMUST00000198713 637 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm28388-201ENSMUST00000186262 437 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm17877-201ENSMUST00000192578 814 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm44158-201ENSMUST00000203881 505 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm23680-201ENSMUST00000083162 164 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.11□□□□□ -0.47
Trim9Q8C7M3 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim9Q8C7M3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm14460-201ENSMUST00000121511 639 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm22138-201ENSMUST00000158748 128 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm42816-201ENSMUST00000198433 325 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms