Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm26976-201ENSMUST00000182929 908 ntBASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm7985-201ENSMUST00000183329 981 ntBASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm44545-201ENSMUST00000208262 746 ntBASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm7082-201ENSMUST00000209880 969 ntBASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm9139-201ENSMUST00000218817 700 ntBASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 AA474408-201ENSMUST00000098110 3339 ntBASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm18014-201ENSMUST00000183369 817 ntBASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.84□□□□□ -0.35
Usp44Q8C2S0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm18968-201ENSMUST00000221319 862 ntBASIC12.84□□□□□ -0.35
Usp44Q8C2S0 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Usp44Q8C2S0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp44Q8C2S0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp44Q8C2S0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp44Q8C2S0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Gm23061-201ENSMUST00000102348 116 ntBASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Gm22379-201ENSMUST00000157480 131 ntBASIC12.83□□□□□ -0.36
Usp44Q8C2S0 Gm5529-201ENSMUST00000165691 891 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms