Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm13281-201ENSMUST00000120871 567 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm14176-201ENSMUST00000121302 477 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm15031-201ENSMUST00000121341 210 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm25394-201ENSMUST00000157338 133 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm38038-201ENSMUST00000193803 259 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm4775-201ENSMUST00000169588 402 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm27826-201ENSMUST00000175282 255 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm6686-201ENSMUST00000178455 258 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm28032-201ENSMUST00000184104 96 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm7539-201ENSMUST00000189789 630 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm38233-201ENSMUST00000194259 807 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Gm29689-201ENSMUST00000221076 589 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.53□□□□□ -0.4
Ddx55Q6ZPL9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ddx55Q6ZPL9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm11473-201ENSMUST00000118980 359 ntBASIC12.52□□□□□ -0.41
Ddx55Q6ZPL9 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms