Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm15528-201ENSMUST00000117821 864 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm15566-201ENSMUST00000121130 590 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm11244-201ENSMUST00000121243 237 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm5733-201ENSMUST00000190232 939 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm21811-201ENSMUST00000096485 930 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Scaf4Q6PFF0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm15264-201ENSMUST00000118050 502 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm14723-201ENSMUST00000118686 215 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm12501-201ENSMUST00000119163 529 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm15595-201ENSMUST00000120840 961 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm24992-201ENSMUST00000157412 130 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm27320-201ENSMUST00000184892 109 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm7255-201ENSMUST00000187371 908 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm43822-201ENSMUST00000200285 476 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm3961-201ENSMUST00000204425 994 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Scaf4Q6PFF0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms