Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sh3rf1Q69ZI1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm22920-201ENSMUST00000102175 109 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm11451-201ENSMUST00000118946 630 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm8737-201ENSMUST00000122208 642 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm13182-201ENSMUST00000122241 312 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm22138-201ENSMUST00000158748 128 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm38117-201ENSMUST00000194653 939 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh3rf1Q69ZI1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sh3rf1Q69ZI1 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm14193-201ENSMUST00000105067 153 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm16071-201ENSMUST00000119589 793 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm12516-201ENSMUST00000120819 385 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm11836-201ENSMUST00000121022 441 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm20495-201ENSMUST00000173902 235 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm8492-201ENSMUST00000182375 987 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm17826-201ENSMUST00000189720 798 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.2□□□□□ -0.62
Sh3rf1Q69ZI1 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms