Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Znf48Q3US17 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC9.49□□□□□ -0.89
Znf48Q3US17 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm43184-201ENSMUST00000197247 542 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm17889-201ENSMUST00000198410 598 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm44681-201ENSMUST00000208447 842 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 AL645546.2-201ENSMUST00000224526 265 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm26448-201ENSMUST00000082446 203 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm42766-201ENSMUST00000200233 1332 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.49□□□□□ -0.89
Znf48Q3US17 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Znf48Q3US17 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Znf48Q3US17 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 AC153959.1-201ENSMUST00000213617 1694 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm4726-201ENSMUST00000135604 736 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm6019-201ENSMUST00000148369 736 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm17075-201ENSMUST00000171924 670 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm3332-201ENSMUST00000189337 928 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm37724-201ENSMUST00000195240 1221 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.48□□□□□ -0.89
Znf48Q3US17 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 AC132918.1-201ENSMUST00000227877 925 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Znf48Q3US17 Snora73b-201ENSMUST00000083419 205 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 Gm10288-201ENSMUST00000084614 537 ntBASIC9.48□□□□□ -0.89
Znf48Q3US17 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms