Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm37944-201ENSMUST00000194233 414 ntBASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b2Q3UJB0 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b2Q3UJB0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Gm37582-201ENSMUST00000192953 1409 ntBASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Gm13215-201ENSMUST00000117559 472 ntBASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Sf3b2Q3UJB0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm22662-201ENSMUST00000175290 256 ntBASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm44236-201ENSMUST00000204492 513 ntBASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm7727-201ENSMUST00000219830 671 ntBASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b2Q3UJB0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms