Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm13284-201ENSMUST00000121020 547 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm42660-201ENSMUST00000197733 947 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm45085-201ENSMUST00000209100 441 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm9487-201ENSMUST00000216600 472 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.22□□□□□ -0.61
Ebf1Q07802 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Id2-203ENSMUST00000222667 958 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.22□□□□□ -0.61
Ebf1Q07802 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf1Q07802 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ebf1Q07802 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.21□□□□□ -0.61
Ebf1Q07802 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.21□□□□□ -0.61
Ebf1Q07802 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf1Q07802 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Ebf1Q07802 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms