Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.12□□□□□ -0.47
Lig3P97386 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.12□□□□□ -0.47
Lig3P97386 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.12□□□□□ -0.47
Lig3P97386 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Lig3P97386 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.12□□□□□ -0.47
Lig3P97386 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.12□□□□□ -0.47
Lig3P97386 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.12□□□□□ -0.47
Lig3P97386 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lig3P97386 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lig3P97386 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.12□□□□□ -0.47
Lig3P97386 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lig3P97386 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lig3P97386 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lig3P97386 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Lig3P97386 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Mir181d-201ENSMUST00000102383 72 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.11□□□□□ -0.47
Lig3P97386 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Gm22379-201ENSMUST00000157480 131 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.11□□□□□ -0.47
Lig3P97386 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lig3P97386 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lig3P97386 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Gm43912-201ENSMUST00000204352 538 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.11□□□□□ -0.47
Lig3P97386 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Lig3P97386 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.11□□□□□ -0.47
Lig3P97386 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lig3P97386 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.11□□□□□ -0.47
Lig3P97386 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lig3P97386 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms