Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm11801-201ENSMUST00000117807 746 ntBASIC11.94□□□□□ -0.5
CiitaP79621 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.94□□□□□ -0.5
CiitaP79621 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Gm7719-201ENSMUST00000182374 975 ntBASIC11.94□□□□□ -0.5
CiitaP79621 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 Gm19918-201ENSMUST00000194858 400 ntBASIC11.94□□□□□ -0.5
CiitaP79621 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
CiitaP79621 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CiitaP79621 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CiitaP79621 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gm24791-201ENSMUST00000104284 131 ntBASIC11.93□□□□□ -0.5
CiitaP79621 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.93□□□□□ -0.5
CiitaP79621 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.93□□□□□ -0.5
CiitaP79621 Gm42430-201ENSMUST00000197209 616 ntBASIC11.93□□□□□ -0.5
CiitaP79621 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.93□□□□□ -0.5
CiitaP79621 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.93□□□□□ -0.5
CiitaP79621 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.93□□□□□ -0.5
CiitaP79621 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.93□□□□□ -0.5
CiitaP79621 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CiitaP79621 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CiitaP79621 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
CiitaP79621 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CiitaP79621 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CiitaP79621 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.93□□□□□ -0.5
CiitaP79621 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CiitaP79621 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm23612-201ENSMUST00000103823 110 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Gm14993-201ENSMUST00000121180 164 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Gm15196-201ENSMUST00000121406 482 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Gm13981-201ENSMUST00000122360 447 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.92□□□□□ -0.5
CiitaP79621 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.92□□□□□ -0.5
CiitaP79621 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm23576-201ENSMUST00000179918 110 ntBASIC11.92□□□□□ -0.5
CiitaP79621 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms